PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.RL2B3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 225aa    MW: 25055.2 Da    PI: 6.3694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.RL2B3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000312877154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 +r  + erE+  R+++N+ f  L  +l  +     + + Ka+iL ++ + +k+L
  Aradu.RL2B3 28 KRIHKAEREKMKREHLNELFLDLANVLDLN----EQNNGKASILNETARLLKDL 77
                 688899*******************99886....78899999****99999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.68E-52582No hitNo description
SuperFamilySSF474594.84E-112592IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.8992777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-62795IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MGSENQTPMT ETSKNRSSGK TNQGKVPKRI HKAEREKMKR EHLNELFLDL ANVLDLNEQN  60
NGKASILNET ARLLKDLLCQ IESLKKENSS LLSESHYVTM EKNELKEETS SLETQIEKLQ  120
VEIQARVTQS KPDLNAPPHV EIEQSEQANF TGQSLQFPPM EPNLQQGPAV FVVPYRPGFQ  180
AAFSAPNVAE VTPKPSSAIS KPHARYPTPA DSWPSLLLGQ QPTSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942612.11e-165PREDICTED: transcription factor bHLH47
SwissprotQ9SN741e-60BH047_ARATH; Transcription factor bHLH47
TrEMBLA0A151SL521e-120A0A151SL52_CAJCA; Transcription factor bHLH47
STRINGGLYMA05G01150.11e-116(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82232531
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.31e-52bHLH family protein